New translations get_dataset_attributes.py (French)

lang/fr/notebooks/utils/get_dataset_attributes.py

@@ -0,0 +1,62 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+"""
+Created on Wed Oct 17 16:07:38 2018
+
+@author: ljia
+"""
+
+import sys
+sys.path.insert(0, "../../")
+from gklearn.utils.graphfiles import loadDataset
+from gklearn.utils.graphdataset import get_dataset_attributes
+
+dslist = [
+    {'name': 'Acyclic', 'dataset': '../../datasets/acyclic/dataset_bps.ds',},
+    {'name': 'Alkane', 'dataset': '../../datasets/Alkane/dataset.ds',
+        'dataset_y': '../../datasets/Alkane/dataset_boiling_point_names.txt',},
+    {'name': 'MAO', 'dataset': '../../datasets/MAO/dataset.ds',},
+    {'name': 'PAH', 'dataset': '../../datasets/PAH/dataset.ds',},
+    {'name': 'MUTAG', 'dataset': '../../datasets/MUTAG/MUTAG.mat',
+        'extra_params': {'am_sp_al_nl_el': [0, 0, 3, 1, 2]}},
+    {'name': 'Letter-med', 'dataset': '../../datasets/Letter-med/Letter-med_A.txt'},
+    {'name': 'ENZYMES', 'dataset': '../../datasets/ENZYMES_txt/ENZYMES_A_sparse.txt'},
+    {'name': 'Mutagenicity', 'dataset': '../../datasets/Mutagenicity/Mutagenicity_A.txt'},
+    {'name': 'D&D', 'dataset': '../../datasets/D&D/DD.mat',
+     'extra_params': {'am_sp_al_nl_el': [0, 1, 2, 1, -1]}},
+    {'name': 'AIDS', 'dataset': '../../datasets/AIDS/AIDS_A.txt'},
+    {'name': 'FIRSTMM_DB', 'dataset': '../../datasets/FIRSTMM_DB/FIRSTMM_DB_A.txt'},
+    {'name': 'MSRC9', 'dataset': '../../datasets/MSRC_9_txt/MSRC_9_A.txt'},
+    {'name': 'MSRC21', 'dataset': '../../datasets/MSRC_21_txt/MSRC_21_A.txt'},
+    {'name': 'SYNTHETIC', 'dataset': '../../datasets/SYNTHETIC_txt/SYNTHETIC_A_sparse.txt'},
+    {'name': 'BZR', 'dataset': '../../datasets/BZR_txt/BZR_A_sparse.txt'},
+    {'name': 'COX2', 'dataset': '../../datasets/COX2_txt/COX2_A_sparse.txt'},
+    {'name': 'DHFR', 'dataset': '../../datasets/DHFR_txt/DHFR_A_sparse.txt'},    
+    {'name': 'PROTEINS', 'dataset': '../../datasets/PROTEINS_txt/PROTEINS_A_sparse.txt'},
+    {'name': 'PROTEINS_full', 'dataset': '../../datasets/PROTEINS_full_txt/PROTEINS_full_A_sparse.txt'},   
+    {'name': 'NCI1', 'dataset': '../../datasets/NCI1/NCI1.mat',
+        'extra_params': {'am_sp_al_nl_el': [1, 1, 2, 0, -1]}},
+    {'name': 'NCI109', 'dataset': '../../datasets/NCI109/NCI109.mat',
+        'extra_params': {'am_sp_al_nl_el': [1, 1, 2, 0, -1]}},
+    {'name': 'NCI-HIV', 'dataset': '../../datasets/NCI-HIV/AIDO99SD.sdf',
+        'dataset_y': '../../datasets/NCI-HIV/aids_conc_may04.txt',},
+
+#     # not working below
+#     {'name': 'PTC_FM', 'dataset': '../../datasets/PTC/Train/FM.ds',},
+#     {'name': 'PTC_FR', 'dataset': '../../datasets/PTC/Train/FR.ds',},
+#     {'name': 'PTC_MM', 'dataset': '../../datasets/PTC/Train/MM.ds',},
+#     {'name': 'PTC_MR', 'dataset': '../../datasets/PTC/Train/MR.ds',},
+]
+
+for ds in dslist:
+    dataset, y = loadDataset(
+        ds['dataset'],
+        filename_y=(ds['dataset_y'] if 'dataset_y' in ds else None),
+        extra_params=(ds['extra_params'] if 'extra_params' in ds else None))
+    attrs = get_dataset_attributes(
+        dataset, target=y, node_label='atom', edge_label='bond_type')
+    print()
+    print(ds['name'] + ':')
+    for atr in attrs:
+        print(atr, ':', attrs[atr])
+    print()