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[Exp] Update exceptions in fcsp exps.

v0.2.x
jajupmochi 4 years ago
parent
commit
29bcfe4dab
2 changed files with 19 additions and 7 deletions
  1. +17
    -7
      gklearn/experiments/thesis/graph_kernels/fcsp/run_jobs_compare_fcsp.py
  2. +2
    -0
      gklearn/experiments/thesis/graph_kernels/fcsp/run_jobs_compare_fcsp_space.py

+ 17
- 7
gklearn/experiments/thesis/graph_kernels/fcsp/run_jobs_compare_fcsp.py View File

@@ -19,7 +19,15 @@ OUT_TIME_LIST = set({('ShortestPath', 'ENZYMES', 'False'),
('StructuralSP', 'NCI1', 'False'),
('ShortestPath', 'NCI109', 'False'),
('StructuralSP', 'NCI109', 'True'),
('ShortestPath', 'NCI-H23', 'True'),
('ShortestPath', 'NCI-H23', 'False'),
('StructuralSP', 'NCI-H23', 'True'),
('StructuralSP', 'NCI-H23', 'False'),
('StructuralSP', 'NCI109', 'False'),
('ShortestPath', 'NCI-H23H', 'True'),
('ShortestPath', 'NCI-H23H', 'False'),
('StructuralSP', 'NCI-H23H', 'True'),
('StructuralSP', 'NCI-H23H', 'False'),
('ShortestPath', 'DD', 'True'),
('ShortestPath', 'DD', 'False'),
('StructuralSP', 'BZR', 'False'),
@@ -35,8 +43,17 @@ OUT_TIME_LIST = set({('ShortestPath', 'ENZYMES', 'False'),
('ShortestPath', 'MCF-7H', 'False'),
('StructuralSP', 'MCF-7H', 'True'),
('StructuralSP', 'MCF-7H', 'False'),
('ShortestPath', 'MOLT-4', 'True'),
('ShortestPath', 'MOLT-4', 'False'),
('StructuralSP', 'MOLT-4', 'True'),
('StructuralSP', 'MOLT-4', 'False'),
('ShortestPath', 'MOLT-4H', 'True'),
('ShortestPath', 'MOLT-4H', 'False'),
('StructuralSP', 'MOLT-4H', 'True'),
('StructuralSP', 'MOLT-4H', 'False'),
('StructuralSP', 'OHSU', 'True'),
('StructuralSP', 'OHSU', 'False'),
('ShortestPath', 'OVCAR-8', 'True'),
('StructuralSP', 'Steroid', 'False'),
('ShortestPath', 'SYNTHETIC', 'False'),
('StructuralSP', 'SYNTHETIC', 'True'),
@@ -52,13 +69,6 @@ OUT_TIME_LIST = set({('ShortestPath', 'ENZYMES', 'False'),
('StructuralSP', 'COIL-DEL', 'False'),
('ShortestPath', 'PROTEINS', 'False'),
('ShortestPath', 'PROTEINS_full', 'False'),
('ShortestPath', 'MOLT-4', 'False'),
('StructuralSP', 'MOLT-4', 'True'),
('StructuralSP', 'MOLT-4', 'False'),
('ShortestPath', 'MOLT-4H', 'True'),
('ShortestPath', 'MOLT-4H', 'False'),
('StructuralSP', 'MOLT-4H', 'True'),
('StructuralSP', 'MOLT-4H', 'False'),
('StructuralSP', 'Mutagenicity', 'True'),
('StructuralSP', 'Mutagenicity', 'False'),
('StructuralSP', 'REDDIT-BINARY', 'True'),


+ 2
- 0
gklearn/experiments/thesis/graph_kernels/fcsp/run_jobs_compare_fcsp_space.py View File

@@ -17,6 +17,7 @@ OUT_TIME_LIST = []
OUT_MEM_LIST = set({('ShortestPath', 'REDDIT-BINARY', 'True'),
('ShortestPath', 'REDDIT-BINARY', 'False'),
('StructuralSP', 'ENZYMES', 'False'),
('StructuralSP', 'AIDS', 'False'),
('ShortestPath', 'DD', 'True'),
('ShortestPath', 'DD', 'False'),
('StructuralSP', 'DD', 'True'),
@@ -55,6 +56,7 @@ OUT_MEM_LIST = set({('ShortestPath', 'REDDIT-BINARY', 'True'),
('ShortestPath', 'P388H', 'False'),
('StructuralSP', 'P388H', 'True'),
('StructuralSP', 'P388H', 'False'),
('StructuralSP', 'NCI1', 'False'),
('ShortestPath', 'NCI-H23', 'True'),
('ShortestPath', 'NCI-H23', 'False'),
('StructuralSP', 'NCI-H23', 'True'),


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