From 4c9bfa73005b031de872381e673f78cac5cb90de Mon Sep 17 00:00:00 2001 From: linlin Date: Mon, 5 Oct 2020 16:36:51 +0200 Subject: [PATCH] New translations synthesized_graphs_N.py (Chinese Simplified) --- .../papers/PRL_2020/synthesized_graphs_N.py | 64 ++++++++++++++++++++++ 1 file changed, 64 insertions(+) create mode 100644 lang/zh/gklearn/experiments/papers/PRL_2020/synthesized_graphs_N.py diff --git a/lang/zh/gklearn/experiments/papers/PRL_2020/synthesized_graphs_N.py b/lang/zh/gklearn/experiments/papers/PRL_2020/synthesized_graphs_N.py new file mode 100644 index 0000000..36bf1bc --- /dev/null +++ b/lang/zh/gklearn/experiments/papers/PRL_2020/synthesized_graphs_N.py @@ -0,0 +1,64 @@ +#!/usr/bin/env python3 +# -*- coding: utf-8 -*- +""" +Created on Mon Sep 21 10:34:26 2020 + +@author: ljia +""" +from utils import Graph_Kernel_List, compute_graph_kernel +import logging + + +def generate_graphs(): + from gklearn.utils.graph_synthesizer import GraphSynthesizer + gsyzer = GraphSynthesizer() + graphs = gsyzer.unified_graphs(num_graphs=1000, num_nodes=20, num_edges=40, num_node_labels=0, num_edge_labels=0, seed=None, directed=False) + return graphs + + +def xp_synthesied_graphs_dataset_size(): + + # Generate graphs. + graphs = generate_graphs() + + # Run and save. + import pickle + import os + save_dir = 'outputs/synthesized_graphs_N/' + if not os.path.exists(save_dir): + os.makedirs(save_dir) + + run_times = {} + + for kernel_name in Graph_Kernel_List: + print() + print('Kernel:', kernel_name) + + run_times[kernel_name] = [] + for num_graphs in [100, 200, 300, 400, 500, 600, 700, 800, 900, 1000]: + print() + print('Number of graphs:', num_graphs) + + sub_graphs = [g.copy() for g in graphs[0:num_graphs]] + + run_time = 'error' + try: + gram_matrix, run_time = compute_graph_kernel(sub_graphs, kernel_name, n_jobs=1) + except Exception as exp: + print('An exception occured when running this experiment:') + LOG_FILENAME = save_dir + 'error.txt' + logging.basicConfig(filename=LOG_FILENAME, level=logging.DEBUG) + logging.exception('') + print(repr(exp)) + run_times[kernel_name].append(run_time) + + pickle.dump(run_time, open(save_dir + 'run_time.' + kernel_name + '.' + str(num_graphs) + '.pkl', 'wb')) + + # Save all. + pickle.dump(run_times, open(save_dir + 'run_times.pkl', 'wb')) + + return + + +if __name__ == '__main__': + xp_synthesied_graphs_dataset_size() \ No newline at end of file