diff --git a/lang/zh/gklearn/kernels/graph_kernel.py b/lang/zh/gklearn/kernels/graph_kernel.py index a8dbd32..d263828 100644 --- a/lang/zh/gklearn/kernels/graph_kernel.py +++ b/lang/zh/gklearn/kernels/graph_kernel.py @@ -37,7 +37,7 @@ class GraphKernel(object): raise Exception('The graph list given is empty. No computation was performed.') else: self._graphs = [g.copy() for g in graphs[0]] - self._gram_matrix = self.__compute_gram_matrix() + self._gram_matrix = self._compute_gram_matrix() self._gram_matrix_unnorm = np.copy(self._gram_matrix) if self._normalize: self._gram_matrix = self.normalize_gm(self._gram_matrix) @@ -45,17 +45,17 @@ class GraphKernel(object): elif len(graphs) == 2: if self.is_graph(graphs[0]) and self.is_graph(graphs[1]): - kernel = self.__compute_single_kernel(graphs[0].copy(), graphs[1].copy()) + kernel = self._compute_single_kernel(graphs[0].copy(), graphs[1].copy()) return kernel, self._run_time elif self.is_graph(graphs[0]) and isinstance(graphs[1], list): g1 = graphs[0].copy() g_list = [g.copy() for g in graphs[1]] - kernel_list = self.__compute_kernel_list(g1, g_list) + kernel_list = self._compute_kernel_list(g1, g_list) return kernel_list, self._run_time elif isinstance(graphs[0], list) and self.is_graph(graphs[1]): g1 = graphs[1].copy() g_list = [g.copy() for g in graphs[0]] - kernel_list = self.__compute_kernel_list(g1, g_list) + kernel_list = self._compute_kernel_list(g1, g_list) return kernel_list, self._run_time else: raise Exception('Cannot detect graphs.') @@ -99,7 +99,7 @@ class GraphKernel(object): return dis_mat, dis_max, dis_min, dis_mean - def __compute_gram_matrix(self): + def _compute_gram_matrix(self): start_time = time.time() if self._parallel == 'imap_unordered': @@ -125,7 +125,7 @@ class GraphKernel(object): pass - def __compute_kernel_list(self, g1, g_list): + def _compute_kernel_list(self, g1, g_list): start_time = time.time() if self._parallel == 'imap_unordered': @@ -151,7 +151,7 @@ class GraphKernel(object): pass - def __compute_single_kernel(self, g1, g2): + def _compute_single_kernel(self, g1, g2): start_time = time.time() kernel = self._compute_single_kernel_series(g1, g2)