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#!/usr/bin/env python3 |
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# -*- coding: utf-8 -*- |
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""" |
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Created on Mon Sep 21 10:34:26 2020 |
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@author: ljia |
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""" |
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from utils import Graph_Kernel_List, Dataset_List, compute_graph_kernel |
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from gklearn.utils.graphdataset import load_predefined_dataset |
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import logging |
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def xp_runtimes_of_all_28cores(): |
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# Run and save. |
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import pickle |
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import os |
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save_dir = 'outputs/runtimes_of_all_28cores/' |
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if not os.path.exists(save_dir): |
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os.makedirs(save_dir) |
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run_times = {} |
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for kernel_name in Graph_Kernel_List: |
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print() |
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print('Kernel:', kernel_name) |
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run_times[kernel_name] = [] |
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for ds_name in Dataset_List: |
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print() |
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print('Dataset:', ds_name) |
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# get graphs. |
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graphs, _ = load_predefined_dataset(ds_name) |
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# Compute Gram matrix. |
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run_time = 'error' |
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try: |
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gram_matrix, run_time = compute_graph_kernel(graphs, kernel_name, n_jobs=28) |
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except Exception as exp: |
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print('An exception occured when running this experiment:') |
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LOG_FILENAME = save_dir + 'error.txt' |
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logging.basicConfig(filename=LOG_FILENAME, level=logging.DEBUG) |
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logging.exception('') |
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print(repr(exp)) |
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run_times[kernel_name].append(run_time) |
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pickle.dump(run_time, open(save_dir + 'run_time.' + kernel_name + '.' + ds_name + '.pkl', 'wb')) |
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# Save all. |
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pickle.dump(run_times, open(save_dir + 'run_times.pkl', 'wb')) |
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return |
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if __name__ == '__main__': |
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xp_runtimes_of_all_28cores() |