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# graphkit-learn
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A python package for graph kernels.

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## How to use?

Simply clone this repository and voilà! Then check [`notebooks`](https://github.com/jajupmochi/graphkit-learn/tree/ljia/notebooks) directory for demos:
* [`notebooks`](https://github.com/jajupmochi/graphkit-learn/tree/ljia/notebooks) directory includes test codes of graph kernels based on linear patterns;
* [`notebooks/tests`](https://github.com/jajupmochi/graphkit-learn/tree/ljia/notebooks/tests) directory includes codes that test some libraries and functions;
* [`notebooks/utils`](https://github.com/jajupmochi/graphkit-learn/tree/ljia/notebooks/utils) directory includes some useful tools, such as a Gram matrix checker and a function to get properties of datasets;
* [`notebooks/else`](https://github.com/jajupmochi/graphkit-learn/tree/ljia/notebooks/else) directory includes other codes that we used for experiments.
Simply clone this repository and voilà! Then check [`notebooks`](https://github.com/jajupmochi/graphkit-learn/tree/master/notebooks) directory for demos:
* [`notebooks`](https://github.com/jajupmochi/graphkit-learn/tree/master/notebooks) directory includes test codes of graph kernels based on linear patterns;
* [`notebooks/tests`](https://github.com/jajupmochi/graphkit-learn/tree/master/notebooks/tests) directory includes codes that test some libraries and functions;
* [`notebooks/utils`](https://github.com/jajupmochi/graphkit-learn/tree/master/notebooks/utils) directory includes some useful tools, such as a Gram matrix checker and a function to get properties of datasets;
* [`notebooks/else`](https://github.com/jajupmochi/graphkit-learn/tree/master/notebooks/else) directory includes other codes that we used for experiments.

## List of graph kernels

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Linlin Jia, Benoit Gaüzère, and Paul Honeine. Graph Kernels Based on Linear Patterns: Theoretical and Experimental Comparisons. working paper or preprint, March 2019. URL https://hal-normandie-univ.archives-ouvertes.fr/hal-02053946.

A comparison of performances of graph kernels on benchmark datasets can be found [here](https://graphkit-learn.readthedocs.io/en/ljia/index.html#experiments).
A comparison of performances of graph kernels on benchmark datasets can be found [here](https://graphkit-learn.readthedocs.io/en/master/index.html#experiments).

## References
[1] Thomas Gärtner, Peter Flach, and Stefan Wrobel. On graph kernels: Hardness results and efficient alternatives. Learning Theory and Kernel Machines, pages 129–143, 2003.


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