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458 Commits (master)
 

Author SHA1 Message Date
  jajupmochi 71df9f591f [Update] Move the import of control out of the __init__(). 4 years ago
  linlin cd98b124fb
Merge pull request #45 from jajupmochi/v0.2.x 4 years ago
  jajupmochi 47951de049 [Update] Move the import of control into the __init__(). 4 years ago
  jajupmochi 684d26bf7e [Exp] Update exceptions in fcsp exps. 4 years ago
  linlin 830f96acbe
Merge pull request #44 from jajupmochi/v0.2.x 4 years ago
  jajupmochi b72fb5db21 [Doc] Update citation. 4 years ago
  jajupmochi bfe64a1f66 [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi 6332e5684d [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi 4bfde8d881 [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi 59a36aa0a0 [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi a638bfa45a [Exp] FCSP: 1. Use no more than 10 tlong tasks. 2. use ljia instead of explicit name. 3. My first SCI journal paper is accepted! 4 years ago
  jajupmochi 8c6168b8f8 [Exp] Update special tasks. 4 years ago
  jajupmochi e5b977734c [Fix bugs] length in get_iters in compute_geds(). 4 years ago
  jajupmochi f282e93322 [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi 367c8e400a [Exp] Update exceptions in fcsp exps. 4 years ago
  jajupmochi c3c3921b20 [Exp] Remove #SBATCH --exclusive in the fcsp exps. 4 years ago
  jajupmochi 1009d5dd67 [Exp] Fix typo bug in gklearn/experiments/ged/stability/group_results.py. 4 years ago
  jajupmochi 85c17b06c1 [Exp] GED stability: add marker file, use edge labels in datasets, test Acyclic and Alkane. 4 years ago
  jajupmochi 743d610827 [Update] Use get_iters istof tqdm when computing GEDs. 4 years ago
  jajupmochi 0b7f281d38 [Add] __init__.py for exps. 4 years ago
  jajupmochi d61db07d58 [Update] Change an excepetion output msg in DataLoader. 4 years ago
  jajupmochi 62145db207 [exp] fcsp: add program for slurm and the exps for space complexity. 4 years ago
  jajupmochi e93ab877b3 [update] Dataset class: Remove null graphs after loading the dataset. 4 years ago
  jajupmochi 349d7a76ca Use get_iters function instead of tqdm in StructuralSP. 4 years ago
  jajupmochi 6326e22abc Put deprecation warning of gklearn.utils.Dataset inside the __init__(). 4 years ago
  jajupmochi 95598397a1 Add pairwise_ged function. 4 years ago
  jajupmochi 920ebda3f9 Hide deprecation warning in graph_file.py. 4 years ago
  jajupmochi 819b256335 Add GED fit distance experiments result figure. 4 years ago
  jajupmochi 09e1d02ae5 Update GED fit distance experiments README. 4 years ago
  linlin 44bdcd6800
Merge pull request #43 from jajupmochi/v0.2.x 4 years ago
  jajupmochi 47b13b4bb5 Add GED fit distance experiments. 4 years ago
  linlin e9154d579f
Merge pull request #42 from jajupmochi/v0.2.x 4 years ago
  jajupmochi 8dce8d8db5 Fix bugs to load all predefined datasets except for Tox21_... and alchemy_.... 4 years ago
  jajupmochi 0373be03ab Modify function to load .cml graph data where an outer cml element is added to the data file (dataset ACE). 4 years ago
  jajupmochi 11a1b46b2e Add support for .cml graph data (dataset Chical). 4 years ago
  linlin d270639b96
Merge pull request #40 from jajupmochi/v0.2.x 4 years ago
  jajupmochi 37158bfffd Update tqdm in parallel. 4 years ago
  jajupmochi cb964cf9f7 Set tqdm usages in all graph kernels with self-defined intervals so that it will print less lines when writing to a file. 4 years ago
  jajupmochi c2a219ca87 Fix bugs in pairwise computationWL subtree kernel. 4 years ago
  jajupmochi 7d5a0a8b87 Add deeper traceback for exceptions in test_graph_kernel.py. 4 years ago
  jajupmochi 6e2b2fa164 Fix a bug in WL subtree kernel. 4 years ago
  jajupmochi 3cfe230313 Fix paths when using pre-given datasets in test_graph_kernels.py. 4 years ago
  jajupmochi adb821687d Update test datasets, use pre-given datasets in test_graph_kernels.py. 4 years ago
  jajupmochi 5beedf4bca Rearrange imports in data_fetcher.py. 4 years ago
  jajupmochi edc189005f Use dataset.Dataset in the tests of graph kernel classes. 4 years ago
  jajupmochi e84bc76866 Add parallelization to WL subtree kernel. 4 years ago
  jajupmochi 79cb3a5fcf Add test of equality of graph kernel results for different parameters. 4 years ago
  jajupmochi 41015c2413 Check and update datasets for exp of comparing fcsp. 4 years ago
  jajupmochi cdcccb2e32 Update get_graph_kernel_by_name(). 4 years ago
  jajupmochi 3c8f09948c Add fcsp experiments. 4 years ago