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82 Commits (5eb69de7ea0bdad948534fa38b32f118dca5cd3c)

Author SHA1 Message Date
  jajupmochi 5eb69de7ea Add ged module. 5 years ago
  jajupmochi f74ca2c869 Add examples. 5 years ago
  jajupmochi 74ce199958 Add examples for graph kernels. 5 years ago
  jajupmochi 95dceaa1ca Add simple preimage experiments. 5 years ago
  jajupmochi 91eb4850f7 Fix typos in printout messages. 5 years ago
  jajupmochi 3eee30e19e Add examples. 5 years ago
  jajupmochi fcff223150 Fix bugs to use unnormalized Gram matrix in RPG. 5 years ago
  jajupmochi 4d47f61d0b Fix bugs to use unnormalized Gram matrix in MPG. 5 years ago
  jajupmochi ea615e8c68 Add more possibilities when using random costs in MPG. 5 years ago
  jajupmochi e872ffe3b5 Update random preimage experiment. 5 years ago
  jajupmochi 924f028c0c Update the RPG experiment. 5 years ago
  jajupmochi e66846f2a8 Implement Marginalized kernel class. 5 years ago
  jajupmochi b4f4f384de Add time and iteration limits for RPG. 5 years ago
  jajupmochi 87e06e9812 expand the number of modifications to increase the possiblity in PRG. 5 years ago
  jajupmochi 5c3651e12c Fix bug: random number genration in RPG when paralelling. 5 years ago
  jajupmochi 980dd1c9cf Add parallel to RPG. 5 years ago
  jajupmochi 50da423a1c Add experiment of random preimage. 5 years ago
  jajupmochi b63a60fe46 Add RandomPreimageGenerator introduced inBakir's paper. 5 years ago
  jajupmochi 7e3da6b0bc Add xp script: remove the best graph from median set. 5 years ago
  jajupmochi 9adaebb680 Add xp: remove the best graph from median set. 5 years ago
  jajupmochi 06c35201b2 Add option to sort graphs by size when computing GEDs for the sake of the stability. 5 years ago
  jajupmochi cac0cfa114 Add tools to analyze preimage results. 5 years ago
  jajupmochi 34506302ce 1. Solve uncolsed file warning in graph_file.py. 2. Solve CXVPY * and @ warning in MPG. 5 years ago
  jajupmochi 7293234d6c Update and fix bugs in MGE: 5 years ago
  jajupmochi 7e94ecaf31 Add k-nn test. 5 years ago
  jajupmochi 85ad732a88 Allow zero costs and no triangle rule when updating edit costs in MPG. 5 years ago
  jajupmochi 34e82bfce8 Add parallel functions to MGE. 5 years ago
  jajupmochi 9a365fac98 Fix bugs for enum and add test for median preimage generator. 5 years ago
  jajupmochi 3bcc60c479 Fix a bug in increasing orders in MGE. 5 years ago
  jajupmochi 909cadd753 Add method of updating orders for non-symbolic labeled graphs in MGE. 5 years ago
  jajupmochi 61d96d52d1 Fix bugs when computing reduced costs in MGE. 5 years ago
  jajupmochi f8fc1d9336 Fix bugs in some graph kernels. 2. Update MedianGraphEstimator. 5 years ago
  jajupmochi 1c635daf9d Fix bugs in MedianGraphEstimator.__decrease_order(). 5 years ago
  jajupmochi 5f7a9ed019 Update MedianGraphEstimator: add __decrease_order() method. 5 years ago
  jajupmochi 25aa64a7dc Fix bugs in MedianGraphEstimator, about __node_maps_from_median and updating nodes/edges. 5 years ago
  jajupmochi b463852b2d Move method get_graph_kernel_by_name(). 5 years ago
  jajupmochi 898bec8063 Add class WLSubtree. 5 years ago
  jajupmochi 78999e859c Fix bugs. 5 years ago
  jajupmochi a69f3c710e Add class WeisfeilerLehman. 5 years ago
  jajupmochi f337fc3fa9 Add class WeisfeilerLehman. 5 years ago
  jajupmochi 92c24ffeca Add class Treelet. 5 years ago
  jajupmochi b7d5ce3efb Fix bugs in class PathUpToH. 5 years ago
  jajupmochi 2248a1308e Update tests. 5 years ago
  jajupmochi 75e42f1838 rearrange gklearn/preimage directory. 5 years ago
  jajupmochi a32e9656b0 Add class PathUpToH. 5 years ago
  jajupmochi a2c58ace61 Add path_up_to_h.py. 5 years ago
  jajupmochi 66119f03ce Update references. 5 years ago
  jajupmochi c1eff86d49 Update graph_files.py. 5 years ago
  jajupmochi 56bc9a8131 Simplify function gklearn.utils.graph_file.load_from_ds(). 5 years ago
  jajupmochi 5e08e9841e Update function gklearn.utils.graph_file.load_ct() for CTFile V2000. 5 years ago