jajupmochi
0d82ebe6b8
copié : notebooks/run_weisfeilerLehmankernel_acyclic.ipynb -> .ipynb_checkpoints/run_weisfeilerLehmankernel_acyclic-checkpoint.ipynb
modifié : README.md
nouveau fichier : notebooks/run_cyclicpatternkernel.ipynb
modifié : notebooks/run_marginalizedkernel_acyclic.ipynb
modifié : notebooks/run_pathkernel_acyclic.ipynb
modifié : notebooks/run_spkernel_acyclic.ipynb
modifié : notebooks/run_treeletkernel_acyclic.ipynb
nouveau fichier : notebooks/run_treepatternkernel.ipynb
modifié : notebooks/run_weisfeilerLehmankernel_acyclic.ipynb
nouveau fichier : pygraph/kernels/cyclicPatternKernel.py
modifié : pygraph/kernels/deltaKernel.py
modifié : pygraph/kernels/pathKernel.py
modifié : pygraph/kernels/results.md
modifié : pygraph/kernels/spKernel.py
nouveau fichier : pygraph/kernels/treePatternKernel.py
modifié : pygraph/kernels/treeletKernel.py
modifié : pygraph/kernels/untildPathKernel.py
modifié : pygraph/kernels/weisfeilerLehmanKernel.py
modifié : pygraph/utils/graphfiles.py
modifié : pygraph/utils/utils.py
nouveau fichier : run_cyclic.py
7 years ago
jajupmochi
122ba2ae06
copié : notebooks/run_weisfeilerLehmankernel_acyclic.ipynb -> .ipynb_checkpoints/run_weisfeilerLehmankernel_acyclic-checkpoint.ipynb
modifié : README.md
nouveau fichier : notebooks/run_cyclicpatternkernel.ipynb
modifié : notebooks/run_marginalizedkernel_acyclic.ipynb
modifié : notebooks/run_pathkernel_acyclic.ipynb
modifié : notebooks/run_spkernel_acyclic.ipynb
modifié : notebooks/run_treeletkernel_acyclic.ipynb
nouveau fichier : notebooks/run_treepatternkernel.ipynb
modifié : notebooks/run_weisfeilerLehmankernel_acyclic.ipynb
nouveau fichier : pygraph/kernels/cyclicPatternKernel.py
modifié : pygraph/kernels/deltaKernel.py
modifié : pygraph/kernels/pathKernel.py
modifié : pygraph/kernels/results.md
modifié : pygraph/kernels/spKernel.py
nouveau fichier : pygraph/kernels/treePatternKernel.py
modifié : pygraph/kernels/treeletKernel.py
modifié : pygraph/kernels/untildPathKernel.py
modifié : pygraph/kernels/weisfeilerLehmanKernel.py
modifié : pygraph/utils/graphfiles.py
modifié : pygraph/utils/utils.py
nouveau fichier : run_cyclic.py
7 years ago
jajupmochi
24eae65154
* ADD *path kernel up to depth d* and its result on dataset Asyclic.
* MOD treelet kernel, retrieve canonkeys of all graphs before calculate kernels, wildly speed it up.
7 years ago
jajupmochi
58e7456f6b
* ADD *path kernel up to depth d* and its result on dataset Asyclic.
* MOD treelet kernel, retrieve canonkeys of all graphs before calculate kernels, wildly speed it up.
7 years ago
jajupmochi
713edf2794
ADD comments to code of treelet kernel.
7 years ago
jajupmochi
8f6f78f6a6
ADD comments to code of treelet kernel.
7 years ago
jajupmochi
a719ac6859
* ADD *treelet kernel* and its result on dataset Asyclic. - linlin
* MOD the way to calculate WL subtree kernel, correct its results. - linlin
* ADD *kernel_train_test* and *split_train_test* to wrap training and testing process. - linlin
* MOD readme.md file, add detailed results of each kernel. - linlin
7 years ago
jajupmochi
e7c5e82c29
* ADD *treelet kernel* and its result on dataset Asyclic. - linlin
* MOD the way to calculate WL subtree kernel, correct its results. - linlin
* ADD *kernel_train_test* and *split_train_test* to wrap training and testing process. - linlin
* MOD readme.md file, add detailed results of each kernel. - linlin
7 years ago
jajupmochi
5d0d9e350b
* ADD *treelet kernel* and its result on dataset Asyclic. - linlin
* MOD the way to calculate WL subtree kernel, correct its results. - linlin
* ADD *kernel_train_test* and *split_train_test* to wrap training and testing process. - linlin
* MOD readme.md file, add detailed results of each kernel. - linlin
7 years ago
jajupmochi
62a0d264d5
* ADD *treelet kernel* and its result on dataset Asyclic. - linlin
* MOD the way to calculate WL subtree kernel, correct its results. - linlin
* ADD *kernel_train_test* and *split_train_test* to wrap training and testing process. - linlin
* MOD readme.md file, add detailed results of each kernel. - linlin
7 years ago
jajupmochi
460e846a8f
* ADD calculation of the time spend to acquire kernel matrices for each kernel. - linlin
* MOD floydTransformation function, calculate shortest paths taking into consideration user-defined edge weight. - linlin
* MOD implementation of nodes and edges attributes genericity for all kernels. - linlin
* ADD detailed results file results.md. - linlin
* MOD Weisfeiler-Lehman subtree kernel and the test code. - linlin
7 years ago
jajupmochi
7e2a15d62f
* ADD calculation of the time spend to acquire kernel matrices for each kernel. - linlin
* MOD floydTransformation function, calculate shortest paths taking into consideration user-defined edge weight. - linlin
* MOD implementation of nodes and edges attributes genericity for all kernels. - linlin
* ADD detailed results file results.md. - linlin
* MOD Weisfeiler-Lehman subtree kernel and the test code. - linlin
7 years ago
jajupmochi
6e7098004c
* MOD Implementation of attributes genericity for both gxl and ct functions
7 years ago
jajupmochi
323590eeff
* MOD Implementation of attributes genericity for both gxl and ct functions
7 years ago
jajupmochi
1cac6d23af
* ADD Weisfeiler-Lehman subtree kernel and its result on dataset Asyclic.
7 years ago
jajupmochi
4ede9698de
* ADD Weisfeiler-Lehman subtree kernel and its result on dataset Asyclic.
7 years ago
jajupmochi
0184a2a06b
* ADD mean average path kernel and its result on dataset Asyclic. - linlin
* ADD delta kernel. - linlin
* MOD reconstruction the code of marginalized kernel. - linlin
7 years ago
jajupmochi
2bd2325c8b
* ADD mean average path kernel and its result on dataset Asyclic. - linlin
* ADD delta kernel. - linlin
* MOD reconstruction the code of marginalized kernel. - linlin
7 years ago
jajupmochi
a74c201d52
change of file structure.
7 years ago
jajupmochi
c567c734bd
change of file structure.
7 years ago
jajupmochi
51911e8bc9
initial
7 years ago
jajupmochi
1f2d94d58c
initial
7 years ago
jajupmochi
8ef59310f9
Merge branch 'ljia' of https://git.litislab.fr/bgauzere/py-graph into ljia
7 years ago
jajupmochi
1dbe6630c8
Merge branch 'ljia' of https://git.litislab.fr/bgauzere/py-graph into ljia
7 years ago
jajupmochi
5fa8e5aeea
initial
7 years ago
linlin
f7fad1a821
Initial commit
7 years ago
jajupmochi
a287df8c3d
initial
7 years ago
linlin
4f71b864f3
Initial commit
7 years ago
Benoit GAUZERE
d6abcc24a1
Minor bug on traversal of shortest path list inutils.py
7 years ago
Benoit GAUZERE
4cd3654e90
Remove non pertinent files
7 years ago
jajupmochi
d8a96ce408
Merge branch 'master' of https://git.litislab.fr/bgauzere/py-graph
add pygraph/kernels/spkernel.py
modify pygraph/utils/util.py and pygraph/utils/graphfiles.py
7 years ago
jajupmochi
4ade070e23
commit
7 years ago
Benoit GAUZERE
e1c2c3ac8e
Add of tests repository to play with pygraph. Use of virtualenv
7 years ago
Benoit GAUZERE
0b2e8ce08f
Correction of minor bug on shortest paths computations
7 years ago
Benoit GAUZERE
66129a66df
Update to NetworkX 2.0
7 years ago
Benoit GAUZERE
595e09c64b
Add of __init__.py files
7 years ago
Benoit GAUZERE
24a8ec3ad3
Re structuration of project
7 years ago
Benoit GAUZERE
eda860455d
Re structuration of project
7 years ago
Benoit GAUZERE
d9dfc8ec68
Update of costfunctions hierarchy to distinguish cost function for ged and for cost matrix
7 years ago
Benoit GAUZERE
a3e75c82b7
This notebook compute ged approx using 2 methods and 2 solvers
7 years ago
Benoit GAUZERE
755c174b4e
Adding a generic lsap solver as parameter
7 years ago
Benoit GAUZERE
46c21bf113
Add of a first binder to C++ implementations of LSAP algorithms
7 years ago
Benoit GAUZERE
51a0f0b3e8
Minor bug on comparaison between sub and del costs for edges
7 years ago
Benoit GAUZERE
91cb5d2ee6
First init - may contains some errors...
7 years ago
Benoit GAUZERE
1defa32627
add README
7 years ago