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64 Commits (e1fe40d8942346c0584ddeb34af2970e31a17116)

Author SHA1 Message Date
  jajupmochi 310b01c347 [Major Feature] WLSubtree kernel can now deal with symbolic edge labels (for Gram matrix computation without parallelization). Meanwhile, the dummy labels are no longer added a priori. 4 years ago
  jajupmochi bd8bf2b234 [Enhancement] Add more verbose for the WL kernel. 4 years ago
  jajupmochi 609c8c1518 [Enhancement] Allow deciding whether or not to make a copy of input graphs in GraphKernel class. 4 years ago
  jajupmochi 785a5c1926 [To finish] Remove dummy labels in treelet kernel (for the contest.) 4 years ago
  jajupmochi 231c050f88 [To finish] Remove dummy labels in treelet kernel (for the contest.) 4 years ago
  jajupmochi 23a938482a [[Enhancement] gklearn.utils.normalize_gram_matrix function now raises… 4 years ago
  jajupmochi bb36d0f507 [Major Feature] Graph kernel classes now can compute kernel matrix between two different list of graphs using fit/transform methods which uses the same scheme as the scikit-learn library! 4 years ago
  jajupmochi d08eddc69c [Enhancement] The global variable now uses kernel classes as values. 4 years ago
  jajupmochi 71df9f591f [Update] Move the import of control out of the __init__(). 4 years ago
  jajupmochi 47951de049 [Update] Move the import of control into the __init__(). 4 years ago
  jajupmochi 349d7a76ca Use get_iters function instead of tqdm in StructuralSP. 4 years ago
  jajupmochi cb964cf9f7 Set tqdm usages in all graph kernels with self-defined intervals so that it will print less lines when writing to a file. 4 years ago
  jajupmochi c2a219ca87 Fix bugs in pairwise computationWL subtree kernel. 4 years ago
  jajupmochi 6e2b2fa164 Fix a bug in WL subtree kernel. 4 years ago
  jajupmochi e84bc76866 Add parallelization to WL subtree kernel. 4 years ago
  jajupmochi 41015c2413 Check and update datasets for exp of comparing fcsp. 4 years ago
  jajupmochi 6e1372e8fa Update: Check if all graphs have edge(s) in ShorestPath. 4 years ago
  jajupmochi e2af943262 [Very important!!!] fix bugs in ssp kernel functions, before this update symbolic/dicrete edge labels were ignored! 4 years ago
  jajupmochi 10a2760085 Enable sp kernel and ssp kernel to NOT use fcsp. 4 years ago
  jajupmochi ed1cc42997 Add graph kernel metadata. 4 years ago
  jajupmochi 2a065f4fb6 Fix a bug in the WL kernel class. 4 years ago
  jajupmochi bc5b8b0d25 Refactor: deprecate the usage of "__" for the "private" members and methods, use "_" instead. 4 years ago
  jajupmochi f05954f302 Fix bugs in four random walk kernels. 4 years ago
  jajupmochi 320964dd16 Update comments, minor bugs for graph kernels. 4 years ago
  jajupmochi 7237aa846c Update random walk kernels. 4 years ago
  jajupmochi 07aa31bbbf Add the ConjugateGradient class. 4 years ago
  jajupmochi a3061244a6 Fix a bug in weisfeilerLehmankernel. 4 years ago
  jajupmochi c898c62eb8 Add the chunksize argument to the function version of graph kernels. 4 years ago
  jajupmochi 9710c639c5 Add the FixPoint graph kernel class. 4 years ago
  jajupmochi ca1f2b535b Fix pickle problem. 4 years ago
  jajupmochi 899daa336a Fix pickle problem. 4 years ago
  jajupmochi 97257a5ef9 Update namespace. 4 years ago
  jajupmochi 87e9da8b65 Fix bugs. 4 years ago
  jajupmochi 570492cf46 Add SpectralDecomposition class. 4 years ago
  jajupmochi 5dcbe76350 Add SylvesterEquation class. 4 years ago
  jajupmochi 6eb6a4a3ad Add CommonWalk class. 4 years ago
  jajupmochi e66846f2a8 Implement Marginalized kernel class. 5 years ago
  jajupmochi 7e94ecaf31 Add k-nn test. 5 years ago
  jajupmochi f8fc1d9336 Fix bugs in some graph kernels. 2. Update MedianGraphEstimator. 5 years ago
  jajupmochi 898bec8063 Add class WLSubtree. 5 years ago
  jajupmochi 78999e859c Fix bugs. 5 years ago
  jajupmochi a69f3c710e Add class WeisfeilerLehman. 5 years ago
  jajupmochi f337fc3fa9 Add class WeisfeilerLehman. 5 years ago
  jajupmochi 92c24ffeca Add class Treelet. 5 years ago
  jajupmochi b7d5ce3efb Fix bugs in class PathUpToH. 5 years ago
  jajupmochi a32e9656b0 Add class PathUpToH. 5 years ago
  jajupmochi a2c58ace61 Add path_up_to_h.py. 5 years ago
  jajupmochi 66119f03ce Update references. 5 years ago
  jajupmochi d60a6e3888 add gklearn.utils.graph_files module, update load_tud function and relevant modules. 5 years ago
  jajupmochi 9fc8fbfeb9 add trim_dataset() method to class Dataset. 5 years ago