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- #!/usr/bin/env python3
- # -*- coding: utf-8 -*-
- """
- Draw running time.
- Created on Mon Sep 24 17:37:26 2018
-
- @author: ljia
- """
-
- import numpy as np
- import matplotlib.pyplot as plt
-
- N = 7
- tgm1 = np.array([0.73,
- 0.88,
- 1.65,
- 1.97,
- 4.89,
- 36.98,
- 704.54])
- tgm2 = np.array([0.77,
- 1.22,
- 2.95,
- 5.70,
- 20.29,
- 147.09,
- 3477.65])
- tms1 = np.array([2.68,
- 3.41,
- 3.36,
- 237.00,
- 7.58,
- 255.48,
- 717.35])
- tms2 = np.array([3.93,
- 4.96,
- 5.84,
- 833.06,
- 26.62,
- 807.84,
- 3515.72])
-
- fig, ax = plt.subplots(1, 1, figsize=(10.5, 4.2))
-
- ind = np.arange(N) # the x locations for the groups
- width = 0.23 # the width of the bars: can also be len(x) sequence
-
- p1 = ax.bar(ind - width * 0.03, tgm1, width, label='compute Gram matrix on $CRIANN$ ($t_1$)', zorder=3)
- p2 = ax.bar(ind - width * 0.03, tms1 - tgm1, width, bottom=tgm1, label='model selection on $CRIANN$', zorder=3)
- p3 = ax.bar(ind + width * 1.03, tgm2, width, label='compute Gram matrix on $laptop$ ($t_2$)', zorder=3)
- p4 = ax.bar(ind + width * 1.03, tms2 - tgm2, width, bottom=tgm2, label='model selection on $laptop$', zorder=3)
-
- ax.set_yscale('log', nonposy='clip')
- ax.set_xlabel('datasets')
- ax.set_ylabel('runtime($s$)')
- #ax.set_title('Runtime of the shortest path kernel on all datasets')
- plt.xticks(ind + width / 2, ('Alkane', 'Acyclic', 'MAO', 'PAH', 'MUTAG',
- 'Letter-med', 'ENZYMES'))
- #ax.set_yticks(np.logspace(-16, -3, num=20, base=10))
- #ax.set_ylim(bottom=1e-15)
- ax.grid(axis='y', zorder=0)
- ax.spines['top'].set_visible(False)
- ax.spines['bottom'].set_visible(False)
- ax.spines['left'].set_visible(False)
- ax.spines['right'].set_visible(False)
- ax.xaxis.set_ticks_position('none')
-
- ax2 = ax.twinx()
- p5 = ax2.plot(ind + width / 2, tgm2 / tgm1, 'bo-',
- label='$t_2 / $ $t_1$')
- ax2.set_ylabel('ratios')
- ax2.spines['top'].set_visible(False)
- ax2.spines['bottom'].set_visible(False)
- ax2.spines['left'].set_visible(False)
- ax2.spines['right'].set_visible(False)
- ax2.xaxis.set_ticks_position('none')
- ax2.yaxis.set_ticks_position('none'
- )
- ax.yaxis.set_ticks_position('none')
-
- fig.subplots_adjust(right=0.63)
- fig.legend(loc='right', ncol=1, frameon=False) # , ncol=5, labelspacing=0.1, handletextpad=0.4, columnspacing=0.6)
-
- plt.savefig('../check_gm/parallel_runtime_on_different_machines.eps', format='eps', dpi=300,
- transparent=True, bbox_inches='tight')
- plt.show()
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